Piskel [Windows/Mac + Browser]
Pixel Art Editor [Browser] -with collaborative editing mode-
Aseprite 0.95 [Windows/Mac/Linux]
Grafx2 [Windows/Mac/Linux]
Paint.NET [Windows]
GIMP [Windows/Mac/Linux]
Paint [Windows]
Pixly [Android]
Photoshop [Windows/Mac]
Pro Motion [Windows]
Pyxel Edit [Windows/Mac]
Aseprite [Windows/Mac]
GraphicsGale [Windows]
Pixaki [iPad]
Sprite Something [iPhone/iPad]
Sprite Lamp [Windows/Mac/Linux]
Collection of Pixel Art Tutorials
Voxel Art Tools:
Qubicle [Windows/Mac] -Commercial-
MagicaVoxel [Windows/Mac] -Free-
Hexel Tools:
Hexels [Windows/Mac] -Commercial-
GIF Creation Tools and Tutorials:
Ways to create animated GIFs
Game Making Tools:
The Big List of Game Making Tools
Piskel - free tool to create pixel art and animated sprites
(additional pixel art tools and tutorials can be found on pixelartus)